BMRB: 5749

Isolation, gene expression and solution structure of a novel moricin analogue, an antibacterial peptide from a lepidopteran insect, Spodoptera litura

Authors

Oizumi, Y., Minami, M., Hemmi, H., Asaoka, A., Yamakawa, M.

Assembly

Sl-moricin monomer

Entity

1. Sl-moricin monomer (polymer, Thiol state: not present), 42 monomers, 4489.355 Da Detail

GKIPVKAIKK AGAAIGKGLR AINIASTAHD VYSFFKPKHK KK

Formula weight

4489.355 Da

Source organism

Spodoptera litura

Exptl. method

NMR

Refine. method

distance geometry, simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 92.5 %, Completeness (bb): 88.4 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	92.5 % (248 of 268)	92.5 % (248 of 268)
Backbone	88.4 % (76 of 86)	88.4 % (76 of 86)
Sidechain	94.5 % (172 of 182)	94.5 % (172 of 182)
Aromatic	100.0 % (18 of 18)	100.0 % (18 of 18)
Methyl	95.8 % (23 of 24)	95.8 % (23 of 24)

1. Sl-moricin

GKIPVKAIKK AGAAIGKGLR AINIASTAHD VYSFFKPKHK KK

Show sample condition

Sample

Temperature 298 (±0.01) K, pH 2.4

#	Name	Isotope labeling	Type	Concentration
1	Sl-moricin			1.5 ~ 0.0 mM
2	CD3OH			100 %

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Protein Blocks Logo

Calculated from 20 models in PDB: 1X22, Strand ID: A Detail

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Release date

2005-09-07

Citation

Isolation, gene expression and solution structure of a novel moricin analogue, antibacterial peptide from a lepidopteran insect, Spodoptera litura
Oizumi, Y., Hemmi, H., Minami, M., Asaoka, A., Yamakawa, M.
Biochim. Biophys. Acta (2005), 1752, 83-92, PubMed 16115804 , DOI 10.1016/j.bbapap.2005.07.013 , Abstract

Related entities 1. Sl-moricin monomer, : 1 : 21 entities Detail

Experiments performed 3 experiments Detail

Chemical shift validation 3 contents Detail