NMR Tool Box


Naohiro Kobayashi, PhD.
Institute for Protein Research, Osaka University

1. MagRO-NMRView (with CNN noise filter)

Support tools for NMR data analysis working with NMR-View
Old version of KUJIRA can be available from RIKEN Link
(The version working with NMRView-J9 is available)

Kobayashi et al., 2007 J. Biomol NMR
Kobayashi et al., 2012 J. Biomol NMR
Kobayashi et al., Bioinformatics. 2018 Dec 15;34(24):4300-4301. doi: 10.1093/bioinformatics/bty581.

Updated: April 19, 2023
download

2. Filt_Robot (Powerful noise filter by Deep Neural Network: New!)

A quick tool for fully automated peak identification and noise filtration using Deep Neural Networks

Kobayashi et al., Bioinformatics. 2018 Dec 15;34(24):4300-4301. doi: 10.1093/bioinformatics/bty581.

Updated: March 13, 2018
download

3. SPARTA validation tool

A command line based validation tool for NMR structure

Kobayashi et al., 2012 J. Biomol NMR

download

4. FitRobot (automated overlay of NMR structure ensemble)

A fully-automated program to identify cores in structure ensemble

Kobayashi, N., 2014 J. Biomol NMR

Updated: November 10, 2020
download


Any questions or request to: Naohiro Kobayashi, PhD.
nk-magro2016(at)protein.osaka-u.ac.jp