Step 1: Preparation for Data Deposition
Before proceeding with your deposition, it will be useful to have on hand the following information:
- Chemical description of the molecules in the system studied.
- Residue sequences for polymers
- Sequence database reference for the biological molecule(s)
- Atom and bond lists for ligands and non-standard residues
- List of contents for at least a representative sample
- List of experimental conditions (temperature, pH, etc)
- A list of names to use for each sample and each set of experimental conditions
For BMRB Deposition
- ASCII file(s) containing chemical shift assignments or coupling constants, preferably in NMR-STAR format,
but ASCII files containing tables with tab or comma delimited fields will be accepted.
- To create NMR-STAR chemical shift assignment files,
please refer to
template generators or
STARch file converter.
Note: Preparation Method of Chemical Shift
- NMR-STAR, the data exchange format used by BMRB, is a flexible version of the CIF format used by PDB.
A full description of the
NMR-STAR format is available from the BMRB web site.
Data entered here will be converted by software into the NMR-STAR format.
For PDB Deposition
- Atomic coordinate files and Restraint files are required.