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BMRB: 18599

4B2S

Solution structure of CCP modules 11-12 of complement factor H

Authors

Makou, E., Mertens, H.D., Maciejewski, M., Soares, D.C., Matis, I., Schmidt, C.Q., Herbert, A.P., Svergun, D.I., Barlow, P.N., Herbert, C.

Assembly

FH11-12

Entity

1. FH11-12 (polymer, Thiol state: all disulfide bound), 127 monomers, 14100.70 Da Detail

EAEAAGVQSC GPPPELLNGN VKEKTKEEYG HSEVVEYYCN PRFLMKGPNK IQCVDGEWTT LPVCIVEEST CGDIPELEHG WAQLSSPPYY YGDSVEFNCS ESFTMIGHRS ITCIHGVWTQ LPQCVAI

Formula weight

14100.7 Da

Entity Connection

disulfide 4 Detail

ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS39:SG	1:CYS64:SG
2	disulfide	sing	1:CYS71:SG	1:CYS113:SG
3	disulfide	sing	1:CYS10:SG	1:CYS53:SG
4	disulfide	sing	1:CYS99:SG	1:CYS124:SG

Source organism

Homo sapiens

Exptl. method

solution NMR

Refine. method

SIMULATED ANNEALING

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 99.2 %, Completeness: 96.5 %, Completeness (bb): 97.3 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	96.5 % (1389 of 1439)	96.6 % (720 of 745)	96.3 % (543 of 564)	96.9 % (126 of 130)
Backbone	97.3 % (722 of 742)	97.3 % (248 of 255)	97.3 % (360 of 370)	97.4 % (114 of 117)
Sidechain	96.1 % (781 of 813)	96.3 % (472 of 490)	95.8 % (297 of 310)	92.3 % (12 of 13)
Aromatic	90.8 % (118 of 130)	90.8 % (59 of 65)	90.3 % (56 of 62)	100.0 % (3 of 3)
Methyl	96.7 % (116 of 120)	98.3 % (59 of 60)	95.0 % (57 of 60)

1. FH11-12

EAEAAGVQSC GPPPELLNGN VKEKTKEEYG HSEVVEYYCN PRFLMKGPNK IQCVDGEWTT LPVCIVEEST CGDIPELEHG WAQLSSPPYY YGDSVEFNCS ESFTMIGHRS ITCIHGVWTQ LPQCVAI

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1.000 atm, Temperature 298.000 K, pH 6.300

#	Name	Isotope labeling	Concentration
1	FH11-12	[U-13C; U-15N]	0.65 mM
2	H2O	natural abundance	90 %
3	D2O	[U-2H]	10 %

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.48 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: -0.48 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.11 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	na	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	na	indirect	0.1013291

Referencing offset: 0.84 ppm, Outliers: 2 Detail

Protein Blocks Logo

Calculated from 20 models in PDB: 4B2S, Strand ID: A Detail

Release date

2012-10-17

Citation

Solution structure of CCP modules 10-12 illuminates functional architecture of the complement regulator, factor H
Makou, E., Mertens, H.D.T., Maciejewski, M., Soares, D.C., Matis, I., Schmidt, C.Q., Herbert, A.P., Svergun, D.I., Barlow, P.N.
J. Mol. Biol. (2012), 424, 295-312, PubMed 23017427 , DOI 10.1016/j.jmb.2012.09.013 , Abstract

Entries sharing articles BMRB: 1 entries Detail

BMRB: 18604 released on 2012-10-17
Title Solution structure of CCP modules 10-11 of complement factor H

Related entities 1. FH11-12, : 1 : 6 : 689 entities Detail

Interaction partners 1. FH11-12, : 17 interactors Detail

More details for 17 interactors identified by 13 citations

Experiments performed 17 experiments Detail

1 2D 1H-15N HSQC/HMQC