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BMRB: 17299

6ZOM

1H, 13C and 15N Chemical shift assignments of the thioredoxin from the anaerobic bacteria Desulfovibrio vulgaris Hildenborough

Authors

Garcin, E.B., Bornet, O., Sebban-Kreuzer, C., Guerlesquin, F.

Assembly

thioredoxin

Entity

1. thioredoxin (polymer, Thiol state: all disulfide bound), 113 monomers, 12259.08 Da Detail

HHHHHHMAAQ ITDATFEASV LKSAIPVLID FWAPWCGPCR AMGPVIDELA AEYEGKVLIV KMNVDDNPAT PSKYGIRAIP TLILFKNGEV VEQVTGAVSK SSIKDMIAQK ALG

Formula weight

12259.08 Da

Entity Connection

disulfide 1 Detail

ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS36:SG	1:CYS39:SG

Source organism

Desulfovibrio vulgaris

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 95.6 %, Completeness: 92.4 %, Completeness (bb): 93.8 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	92.4 % (1188 of 1286)	93.2 % (615 of 660)	90.6 % (464 of 512)	95.6 % (109 of 114)
Backbone	93.8 % (623 of 664)	94.2 % (213 of 226)	93.1 % (309 of 332)	95.3 % (101 of 106)
Sidechain	91.5 % (666 of 728)	92.6 % (402 of 434)	89.5 % (256 of 286)	100.0 % (8 of 8)
Aromatic	61.7 % (58 of 94)	74.5 % (35 of 47)	46.7 % (21 of 45)	100.0 % (2 of 2)
Methyl	100.0 % (146 of 146)	100.0 % (73 of 73)	100.0 % (73 of 73)

1. Thioredoxin

HHHHHHMAAQ ITDATFEASV LKSAIPVLID FWAPWCGPCR AMGPVIDELA AEYEGKVLIV KMNVDDNPAT PSKYGIRAIP TLILFKNGEV VEQVTGAVSK SSIKDMIAQK ALG

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 290 K, pH 5.5

#	Name	Isotope labeling	Concentration
1	oxidized thioredoxin	[U-99% 13C; U-99% 15N]	1 mM
2	H2O	natural abundance	90 %
3	D2O	natural abundance	10 %
4	NaCl	natural abundance	100 mM
5	Potassium phosphate	natural abundance	50 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	external	indirect	0.2514495
¹H	DSS	methyl protons	external	direct	1.0
¹⁵N	DSS	methyl protons	external	indirect	0.1013291

Referencing offset: 0.19 ppm, Outliers: 2 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	external	indirect	0.2514495
¹H	DSS	methyl protons	external	direct	1.0
¹⁵N	DSS	methyl protons	external	indirect	0.1013291

Referencing offset: 0.19 ppm, Outliers: 2 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	external	indirect	0.2514495
¹H	DSS	methyl protons	external	direct	1.0
¹⁵N	DSS	methyl protons	external	indirect	0.1013291

Referencing offset: -0.04 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	external	indirect	0.2514495
¹H	DSS	methyl protons	external	direct	1.0
¹⁵N	DSS	methyl protons	external	indirect	0.1013291

Referencing offset: 0.23 ppm, Outliers: 5 Detail

Release date

2011-02-03

Citation

1H, 13C and 15N chemical shift assignments of the thioredoxin from the obligate anaerobe Desulfovibrio vulgaris Hildenborough
Garcin, E.B., Bornet, O., Pieulle, L., Guerlesquin, F., Sebban-Kreuzer, C.
Biomol. NMR Assign. (2011), 5, 177-179, PubMed 21287302 , DOI 10.1007/s12104-011-9294-5 , Abstract

Entries sharing articles BMRB: 1 entries Detail

BMRB: 17300 released on 2011-02-03
Title 1H, 13C and 15N Chemical shift assignments of the thioredoxin from the anaerobic bacteria Desulfovibrio vulgaris Hildenborough

Related entities 1. thioredoxin, : 1 : 242 entities Detail

Experiments performed 14 experiments Detail

1 2D 1H-15N HSQC