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Solid-state Chemical Shift Assignments for p150Glued CAP-Gly Domain in complex with EB1 at 19.9 T
Authors
Yan, S., Hou, G., Schwieters, C.D., Ahmed, S., Williams, J.C., Polenova, T.
Assembly
CAP-Gly/EB1 heterotetramer
Entity
1. CAP-Gly (polymer, Thiol state: all free), 89 monomers, 9512.475 × 2 Da Detail

STEASARPLR VGSRVEVIGK GHRGTVAYVG ATLFATGKWV GVILDEAKGK NDGTVQGRKY FTCDEGHGIF VRQSQIQVFE DGADTTSPE


2. EB1 (polymer, Thiol state: unknown), 75 monomers, 8746.571 × 2 Da Detail

AELMQQVNVL KLTVEDLEKE RDFYFGKLRN IELICQENEG ENDPVLQRIV DILYATDEGF VIPDEGGPQE EQEEY


Total weight
36518.094 Da
Max. entity weight
9512.475 Da
Source organism
Rattus norvegicus
Exptl. method
NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 42.1 %, Completeness: 36.0 %, Completeness (bb): 40.1 % Detail

Polymer type: polypeptide(L)

Total13C15N
All36.0 % (324 of 899)35.2 % (255 of 724)39.4 % (69 of 175)
Backbone40.1 % (254 of 633)39.2 % (186 of 474)42.8 % (68 of 159)
Sidechain30.3 % (125 of 412)31.3 % (124 of 396) 6.3 % (1 of 16)
Aromatic 7.7 % (5 of 65) 7.8 % (5 of 64) 0.0 % (0 of 1)
Methyl41.8 % (38 of 91)41.8 % (38 of 91)

1. CAP-Gly

STEASARPLR VGSRVEVIGK GHRGTVAYVG ATLFATGKWV GVILDEAKGK NDGTVQGRKY FTCDEGHGIF VRQSQIQVFE DGADTTSPE

2. EB1

AELMQQVNVL KLTVEDLEKE RDFYFGKLRN IELICQENEG ENDPVLQRIV DILYATDEGF VIPDEGGPQE EQEEY

Sample

Solvent system 100% H2O, Pressure 1 atm, Temperature 277 K, pH 7.0, Details The complex of CAP-Gly/EB1 was precipitated by 50% PEG-3350.


#NameIsotope labelingTypeConcentration
1CAP-Gly[U-13C; U-15N]11.8 mg
2EB1natural abundance10.2 mg
3H2Onatural abundance100 %

LACS Plot; CA
Referencing offset: -0.04 ppm, Outliers: 2 Detail
LACS Plot; CB
Referencing offset: -0.04 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: 0.11 ppm, Outliers: 1 Detail
Release date
2013-06-03
Citation
Three-dimensional structure of CAP-gly domain of mammalian dynactin determined by magic angle spinning NMR spectroscopy: conformational plasticity and interactions with end-binding protein EB1
Yan, S., Hou, G., Schwieters, C.D., Ahmed, S., Williams, J.C., Polenova, T.
J. Mol. Biol. (2013), 425, 4249-4266, PubMed 23648839 , DOI 10.1016/j.jmb.2013.04.027 ,
Entries sharing articles BMRB: 1, Swiss-Prot: 1 entries Detail
  BMRB: 19025 released on 2013-05-29
    Title Solid-state Chemical Shift Assignments for CAP-Gly Domain of Mammalian at 19.9 T
  Swiss-Prot: P28023 released on 1992-08-01
    Title DCTN1_RAT Entity Dynactin subunit 1
Related entities 1. CAP-Gly, : 1 : 4 : 9 : 104 entities Detail
Related entities 2. EB1, : 1 : 2 : 15 entities Detail
Interaction partners 1. CAP-Gly, : 4 interactors Detail
Experiments performed 5 experiments Detail
Chemical shift validation 4 contents Detail