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Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G26P mutant TMD
Authors
Silber, M., Muhle-Goll, C.
Assembly
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155)
Entity
1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155) (polymer, Thiol state: not present), 29 monomers, 3584.429 Da Detail

KKKLGFFLVT FGFIWPMMLL HFTIQQRKK


Formula weight
3584.429 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 96.6 %, Completeness: 70.5 %, Completeness (bb): 74.4 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All70.5 % (292 of 414)75.7 % (165 of 218)61.0 % (100 of 164)84.4 % (27 of 32)
Backbone74.4 % (128 of 172)84.7 % (50 of 59)61.2 % (52 of 85)92.9 % (26 of 28)
Sidechain69.5 % (187 of 269)71.1 % (113 of 159)68.9 % (73 of 106)25.0 % (1 of 4)
Aromatic43.9 % (29 of 66)51.5 % (17 of 33)34.4 % (11 of 32)100.0 % (1 of 1)
Methyl81.3 % (26 of 32)81.3 % (13 of 16)81.3 % (13 of 16)

1. entity 1

KKKLGFFLVT FGFIWPMMLL HFTIQQRKK

Sample

Solvent system trifluoroethanol/water, Pressure 1 atm, Temperature 300 K, pH 7.0, Details 0.5 mM GNTV_G26P, trifluoroethanol/water


#NameIsotope labelingTypeConcentration
1GNTV_G26Pnatural abundance0.5 mM

Release date
2022-03-16
Citation
Helical stability of the GnTV transmembrane domain impacts on SPPL3 dependent cleavage
Papadopoulou, A.A., Stelzer, W., Silber, M., Schlosser, C., Spitz, C., Haug-Kroper, M., Straub, T., Muller, S.A., Lichtenthaler, S.F., Muhle-Goll, C., Langosch, D., Fluhrer, R.
Sci. Rep. (2022), 12, 20987-20987, PubMed 36470941 , DOI 10.1038/s41598-022-24772-8 ,
Entries sharing articles BMRB: 3 entries Detail
  BMRB: 34710 released on 2022-03-22
    Title Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) TMD
  BMRB: 34712 released on 2022-03-16
    Title Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G22L mutant TMD
  BMRB: 34713 released on 2022-03-16
    Title Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G22L and G26L double mutant TMD
Related entities 1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155), : 1 : 3 : 13 entities Detail
Interaction partners 1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155), : 2 interactors Detail
Experiments performed 4 experiments Detail
Chemical shift validation 3 contents Detail
Keywords Glycosyltransferase, GnTV, Golgi, MEMBRANE PROTEIN, SPPL3, TMD, intramembrane